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Issue 7, April 2002
Chlamydomonas: A Powerful Tool For Biological Research
Cristina Tang
Biochemistry, Simon Fraser University
tang@jyi.org
Under
the bright sunlight, tiny, green creatures move gracefully in their
pond of water. With two long ‘antennae' leading the way, these creatures
seem to be swimming about randomly, looking as if they are trying
to position themselves in the right place to receive signals from
outer space. Despite their appearances, these small creatures are
not the classical science-fiction inhabitants of Mars, or "E.T."
lost on Earth. They have lived on Earth for millions of years. They
are Chlamydomonas.
Chlamydomonas reinhardtii are unicellular eukaryotes that
use two flagella for motility. They can be easily grown at room
temperature on agar plates or in liquid culture. Though not as well
known as fruit flies or mice, they are some of the most popular
organisms in laboratory science today. Traits that make Chlamydomonas
a popular organism for research include a well-defined cell cycle
and a single set of chromosomes. In diploid organisms, which have
two sets of chromosomes, a normal gene can sometimes mask a mutation.
For example, a person with a gene defective for the utilization
of the sugar fructose may not show fructose intolerance because
he/she still has a ‘good' copy of the gene.But since Chlamydomonas,
which is haploid, only has a single copy of each gene, mutations
cannot be masked. This substantially facilitates the isolation of
Chlamydomonas that have mutations on interesting genes, such
as those that have human counterparts or genes encoding a protein
with a critical function in the cell. It is not surprising then
that in recent years the value of Chlamydomonas in research
has soared rapidly and has gone from obscure algae taxonomy books
to the papers published in today's most prestigious scientific journals.
Dr. Lynne Quarmby, organizer of this year's International
Conference on the Cell and Molecular Biology of Chlamydomonas
in Vancouver, Canada, has investigated several features of this
organism, such as deflagellation and centrosome function, for nearly
15 years. In her eyes, "chlamys," as she calls them, are
truly wonderful organisms for their usefulness in the study of many
biological problems. As a flagellated, haploid organism, Chlamydomonas
is especially suited for the study of basal bodies - cylindrical
organelles - and of flagellar assembly and function. The walls of
basal bodies are composed of nine sets of triplet microtubules,
and are involved in the formation of cilia and flagella. Defects
in the proper assembly and movement of human cilia and/or flagella
have been linked to several human diseases. For example, the cilia
found on the linings of the respiratory tract are responsible for
removing the dust and dirt from the air when we breathe. Complications
in the respiratory system may arise if these cilia are absent or
immobile. Scientists therefore believe it is very important to understand
the formation, assembly, and normal function of basal bodies, cilia,
and flagella.
Studies of Chlamydomonas with defects in flagellar assembly
or movement have generated a wealth of information about basal bodies
and cilia/flagella by identifying key components of these organelles.The
protein, d-tubulin, for example,
has been discovered in Chlamydomonas that produce a defective
d-tubulin due to mutations
in the UNI3 gene. Whereas wild-type Chlamydomonas are biflagellated,
Chlamydomonas with defective d-tubulin
grow zero or only one flagella. These and other observations allowed
researchers to conclude that in normal Chlamydomonas, the
d-tubulin protein was required
for the normal assembly of basal bodies, the organelles that are
essential for flagellar formation.
In addition, the recent discovery of a non-neuronal transport system
in Chlamydomonas by the Rosenbaum Lab at Yale University
has further contributed to our understanding of flagellar assembly.
This transport pathway uses a protein called kinesin II to carry
key flagellar components from the cell body where they are synthesized
to the ends of the flagellum for assembly. Therefore, defects in
kinesin II impair the proper assembly of cilia and flagella which
affect their growth and movement. Furthermore, kinesin II has also
been found in non-motile cilia present in the photoreceptor or light
sensing cells of our eyes where they transport a substantial amount
of material between the two segments of the cell through the so-called
connecting cilium. Failure to transport the molecules across the
cilium leads to death of the photoreceptor cell. Chlamydomonas
studies have not yet produced cures for any of the diseases linked
to defective cilia or flagella, such as polycystic kidney disease
or male infertility caused by sperm flagellar motility defects.
However, these studies have given us a better insight into the causes
of these illnesses.
Chlamydomonas are also good for surprising us with novel
biological phenomena, which takes them beyond merely being useful
for studying fundamental biological processes. It has been found,
for example, that they can be used to generate hydrogen from light,
water, and basic nutrients. Normally, the production of hydrogen
gas in Chlamydomonas is limited in the presence of oxygen.
It has been discovered, however, that Chlamydomonas can produce
significant amounts of hydrogen if they are starved from sulfur
for two days. Further research in this area is of interest because
it holds the possibility of generating large quantities of hydrogen,
which is a renewable fuel, from cheap and abundant sources such
as light and water.
To review research on Chlamydomonas presented in 2000 in
the Netherlands, please refer to http://quarmby.ca/chlamy2002/review.pdf.
Suggested Reading
Dutcher,
S., and E.C. Trabuco. "The UNI3 Gene is required for assembly
of basal bodies of Chlamydomonas and encodes d-tubulin,
a new member of the tubulin superfamily." Mol. Biol. Cell,
9(6) (1998), 1293-1308.
Rosenbaum, J.L., et.al "Intraflagellar transport: The eyes have
it." J. Cell Biol. 144(1999), 385-388.
Beech, P.L., et.al "Localization of kinesin superfamily proteins
to the connecting cilium of fish photoreceptors." J. Cell
Sci. 109(1996), 889-897.
Muresan, V., et.al "The kinesin Motor KIF3A is a component of
the presynaptic ribbon in vertebrate photoreceptors." J. Neurosc.
19(1999), 1027-1037.
Sung, C. H., et.al "A rhodopsin gene mutation responsible for
autosomal dominant retinitis pigmentosa results in a protein that
is defective in localization to the photoreceptor outer segment."
J. Neurosci. 14(1994), 5818-5833.
Gfeller, R. P., et.al "Fermentative metabolism of Chlamydomonas
reinhardtii: I. Analysis of fermentative products from starch in dark
and light." Plant Physiol. 75(1984), 212-218.
Melis, A., et.al "Sustained photobiological hydrogen gas production
upon reversible inactivation of oxygen evolution in the green alga
Chlamydomonas reinhardtii." Plant Physiol. 122(2000),
127-136.
Journal
of Young Investigators. 2002. Volume Five.
Copyright © 2002 by Cristina Tang and JYI. All rights reserved.
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